PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_74.84
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family ERF
Protein Properties Length: 256aa    MW: 28798.3 Da    PI: 5.3059
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_74.84genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.8e-1868117255
                          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   y+GVr++  +++Wv+e+r+p   +k++r++lg++ t+e+Aa+a++ a+++l+g
  evm.model.supercontig_74.84  68 IYRGVRRRN-KNKWVCELREP---NKKTRIWLGTYPTPEMAARAHDVAALALRG 117
                                  69****888.7*********8...347*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.5E-1467117IPR001471AP2/ERF domain
CDDcd000185.11E-2967127No hitNo description
PROSITE profilePS5103221.81268125IPR001471AP2/ERF domain
SMARTSM003808.0E-2968131IPR001471AP2/ERF domain
SuperFamilySSF541713.79E-2168127IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-3068127IPR001471AP2/ERF domain
PRINTSPR003671.5E-76980IPR001471AP2/ERF domain
PRINTSPR003671.5E-791107IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
MEIFRQLSEH YPFGSSTSMF LDKPESSTSS DPGTLRRPAH SDEDVILASS RPKKRAGRRV  60
FKETRHPIYR GVRRRNKNKW VCELREPNKK TRIWLGTYPT PEMAARAHDV AALALRGKSA  120
CLNFADSAWR LPQPASMDAK DIRRAAAEAA EAFRPLEREE AAGGEVREVL ERVKISDHRD  180
VGKGKEVESG DQNESYLEEN VFFMDEEAVF DMPGLLANMA EGLLLSPPPL VESDRTNMED  240
EESSDVDLSL WSYSV*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00453DAPTransfer from AT4G25480Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015867318.14e-97PREDICTED: dehydration-responsive element-binding protein 1A-like
RefseqXP_015901870.14e-97PREDICTED: dehydration-responsive element-binding protein 1A-like
SwissprotQ9M0L03e-68DRE1A_ARATH; Dehydration-responsive element-binding protein 1A
TrEMBLB9RC197e-96B9RC19_RICCO; Dehydration-responsive element-binding protein 1F, putative
STRINGPOPTR_0012s13870.12e-87(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM35528187
Representative plantOGRP6161718
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.15e-55dehydration response element B1A